Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCNX3Pecanex 3. (1934 aa)    
Predicted Functional Partners:
MPHOSPH9
M-phase phosphoprotein 9.
      
 0.736
TNFAIP1
TNF alpha induced protein 1.
      
 0.689
KIF22
Kinesin family member 22.
      
 0.582
KIF14
Kinesin family member 14.
      
 0.570
GBA2
Glucosylceramidase beta 2.
      
 0.568
KLHL28
Kelch like family member 28.
    
 
 0.474
CPSF1
Cleavage and polyadenylation specific factor 1.
   
    0.474
INTS1
Integrator complex subunit 1.
   
    0.472
SNX6
Sorting nexin 6.
      
 0.468
ENSCAPP00000012254
annotation not available
      
 0.460
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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