Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006305annotation not available (357 aa)    
Predicted Functional Partners:
GCM2
Glial cells missing transcription factor 2.
   
   0.908
ENSCAPP00000003376
annotation not available
    
  0.737
CCT2
Chaperonin containing TCP1 subunit 2.
    
  0.737
CCT4
Chaperonin containing TCP1 subunit 4.
    
  0.737
BAG3
BCL2 associated athanogene 3.
    
 0.736
CCT3
Chaperonin containing TCP1 subunit 3.
    
  0.720
CAMK4
Calcium/calmodulin dependent protein kinase IV.
    
 0.676
C20orf85
Chromosome 20 open reading frame 85.
   
 
 0.676
LRRC34
Leucine rich repeat containing 34.
   
 
 0.674
CCDC151
Coiled-coil domain containing 151.
    
  0.667
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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