Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006311annotation not available (95 aa)    
Predicted Functional Partners:
EFCAB3
EF-hand calcium binding domain 3.
    
 
 0.924
C20orf85
Chromosome 20 open reading frame 85.
   
 
 0.881
ENSCAPP00000003376
annotation not available
    
  0.851
CCT2
Chaperonin containing TCP1 subunit 2.
    
  0.851
CCT4
Chaperonin containing TCP1 subunit 4.
    
  0.851
CCT3
Chaperonin containing TCP1 subunit 3.
    
  0.841
LRRC34
Leucine rich repeat containing 34.
   
 
 0.824
CAMK4
Calcium/calmodulin dependent protein kinase IV.
    
 0.816
CCDC65
Coiled-coil domain containing 65.
   
 
 0.816
GCM2
Glial cells missing transcription factor 2.
   
   0.812
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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