STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006313annotation not available (94 aa)    
Predicted Functional Partners:
RPL35
Ribosomal protein L35.
  
 0.959
RPL5
Ribosomal protein L5.
  
 
 0.948
RPL23
Ribosomal protein L23.
  
   0.942
ENSCAPP00000016878
annotation not available
  
 
 0.922
GTPBP4
GTP binding protein 4.
   
 0.909
RPS18
Ribosomal protein S18.
  
 
 0.909
ENSCAPP00000006028
annotation not available
  
 
 0.908
RPS9
Ribosomal protein S9.
  
 
 0.892
ENSCAPP00000000576
annotation not available
    
   0.884
ENSCAPP00000004781
annotation not available
    
   0.884
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.