STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41Erythrocyte membrane protein band 4.1. (781 aa)    
Predicted Functional Partners:
MPP1
Membrane palmitoylated protein 1.
   
 0.830
SPTB
Spectrin beta, erythrocytic.
   
 0.732
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.699
TFDP2
Transcription factor Dp-2.
   
    0.673
TMOD1
Tropomodulin 1.
    
 0.671
EZR
Ezrin.
     
0.666
TMOD4
Tropomodulin 4.
    
 0.663
ENSCAPP00000018021
annotation not available
   
 0.662
ENSCAPP00000005571
annotation not available
    
 0.654
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
  0.642
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.