STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHPRHSNF2 histone linker PHD RING helicase. (1593 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.915
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 0.905
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.885
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
    
 0.881
PCNA
Proliferating cell nuclear antigen.
   
 0.835
ENSCAPP00000017986
annotation not available
    
 0.827
ENSCAPP00000002614
annotation not available
    
 0.812
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
    
 0.812
WRN
WRN RecQ like helicase.
  
 
 0.787
ENSCAPP00000013082
annotation not available
    
 0.735
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.