TCAP protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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Textmining

[Homology]

Score

TCAP

Titin-cap. (167 aa)

Predicted Functional Partners:

ENSCAPP00000015910

0.990

ENSCAPP00000003308

0.980

ENSCAPP00000015741

0.980

MYOZ2

0.966

CSRP3

0.958

NAGLU

0.949

TRIM63

0.943

MYLK

0.914

ENSCAPP00000016063

0.914

MYL2

0.873

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSRP3	ENSCAPP00000003308	ENSCAPP00000011799	ENSCAPP00000003308	Cysteine and glycine rich protein 3.	annotation not available	0.481
CSRP3	ENSCAPP00000015741	ENSCAPP00000011799	ENSCAPP00000015741	Cysteine and glycine rich protein 3.	annotation not available	0.481
CSRP3	ENSCAPP00000015910	ENSCAPP00000011799	ENSCAPP00000015910	Cysteine and glycine rich protein 3.	annotation not available	0.603
CSRP3	MYL2	ENSCAPP00000011799	ENSCAPP00000002428	Cysteine and glycine rich protein 3.	Myosin light chain 2.	0.941
CSRP3	MYOZ2	ENSCAPP00000011799	ENSCAPP00000009724	Cysteine and glycine rich protein 3.	Myozenin 2.	0.964
CSRP3	TCAP	ENSCAPP00000011799	ENSCAPP00000006327	Cysteine and glycine rich protein 3.	Titin-cap.	0.958
ENSCAPP00000003308	CSRP3	ENSCAPP00000003308	ENSCAPP00000011799	annotation not available	Cysteine and glycine rich protein 3.	0.481
ENSCAPP00000003308	ENSCAPP00000015910	ENSCAPP00000003308	ENSCAPP00000015910	annotation not available	annotation not available	0.692
ENSCAPP00000003308	ENSCAPP00000016063	ENSCAPP00000003308	ENSCAPP00000016063	annotation not available	annotation not available	0.772
ENSCAPP00000003308	MYL2	ENSCAPP00000003308	ENSCAPP00000002428	annotation not available	Myosin light chain 2.	0.970
ENSCAPP00000003308	MYOZ2	ENSCAPP00000003308	ENSCAPP00000009724	annotation not available	Myozenin 2.	0.474
ENSCAPP00000003308	TCAP	ENSCAPP00000003308	ENSCAPP00000006327	annotation not available	Titin-cap.	0.980
ENSCAPP00000003308	TRIM63	ENSCAPP00000003308	ENSCAPP00000010598	annotation not available	Tripartite motif containing 63.	0.923
ENSCAPP00000015741	CSRP3	ENSCAPP00000015741	ENSCAPP00000011799	annotation not available	Cysteine and glycine rich protein 3.	0.481
ENSCAPP00000015741	MYL2	ENSCAPP00000015741	ENSCAPP00000002428	annotation not available	Myosin light chain 2.	0.970
ENSCAPP00000015741	MYOZ2	ENSCAPP00000015741	ENSCAPP00000009724	annotation not available	Myozenin 2.	0.474
ENSCAPP00000015741	TCAP	ENSCAPP00000015741	ENSCAPP00000006327	annotation not available	Titin-cap.	0.980
ENSCAPP00000015741	TRIM63	ENSCAPP00000015741	ENSCAPP00000010598	annotation not available	Tripartite motif containing 63.	0.923
ENSCAPP00000015910	CSRP3	ENSCAPP00000015910	ENSCAPP00000011799	annotation not available	Cysteine and glycine rich protein 3.	0.603
ENSCAPP00000015910	ENSCAPP00000003308	ENSCAPP00000015910	ENSCAPP00000003308	annotation not available	annotation not available	0.692