Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SECISBP2SECIS binding protein 2. (688 aa)    
Predicted Functional Partners:
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
   
 0.992
HSPA5
Heat shock protein family A (Hsp70) member 5.
  
 0.934
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.890
ENSCAPP00000003595
annotation not available
     
 0.854
SARS1
seryl-tRNA synthetase 1.
     
 0.853
RPL35
Ribosomal protein L35.
    
  0.823
GPS1
G protein pathway suppressor 1.
    
 0.801
EDEM2
ER degradation enhancing alpha-mannosidase like protein 2.
    
 0.779
SELENOT
Selenoprotein T.
    
 
 0.757
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.748
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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