Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSBP1Single stranded DNA binding protein 1. (145 aa)    
Predicted Functional Partners:
MRPS2
Mitochondrial ribosomal protein S2.
   
 0.968
INTS3
Integrator complex subunit 3.
    
 
 0.961
CLPP
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
  
 0.951
MRPS6
Mitochondrial ribosomal protein S6.
  
  
 0.918
MRPL35
Mitochondrial ribosomal protein L35.
   
 
 0.915
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
   
 0.904
MSH6
mutS homolog 6.
    
 
 0.901
POLG2
DNA polymerase gamma 2, accessory subunit.
    
 0.899
ENSCAPP00000008966
annotation not available
   
 0.895
POLG
DNA polymerase gamma, catalytic subunit.
   
 0.895
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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