STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP1Single stranded DNA binding protein 1. (145 aa)    
Predicted Functional Partners:
MRPS6
Mitochondrial ribosomal protein S6.
  
  
 0.970
ENSCAPP00000002185
annotation not available
   
 
 0.922
MRPL21
Mitochondrial ribosomal protein L21.
   
  
 0.899
TOP3B
DNA topoisomerase III beta.
  
 
 0.885
TOP3A
DNA topoisomerase III alpha.
  
 
 0.885
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.826
ENSCAPP00000004583
annotation not available
   
 
 0.820
ENSCAPP00000009425
annotation not available
   
 
 0.820
MRPS7
Mitochondrial ribosomal protein S7.
  
   0.815
RPS5
Ribosomal protein S5.
  
   0.809
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.