Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP2GTP binding protein 2. (501 aa)    
Predicted Functional Partners:
ENSCAPP00000017572
annotation not available
    
   0.812
ENSCAPP00000000440
annotation not available
    
 
 0.780
LAMC3
Laminin subunit gamma 3.
    
 
 0.766
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
      
 0.743
MRRF
Mitochondrial ribosome recycling factor.
      
 0.741
WDR90
WD repeat domain 90.
    
  0.717
AP4M1
Adaptor related protein complex 4 subunit mu 1.
    
 
 0.695
DCAF17
DDB1 and CUL4 associated factor 17.
      
 0.686
CP
Ceruloplasmin.
     
 0.664
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
      
 0.648
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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