STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C21orf62Chromosome 21 open reading frame 62. (230 aa)    
Predicted Functional Partners:
ITGBL1
Integrin subunit beta like 1.
      
 0.535
ENSCAPP00000016519
annotation not available
      
 0.516
GART
annotation not available
      
 0.513
PAXBP1
PAX3 and PAX7 binding protein 1.
 
    
 0.459
FRRS1L
Ferric chelate reductase 1 like.
      
 0.450
ITPRID2
ITPR interacting domain containing 2.
      
 0.450
ZNF106
Zinc finger protein 106.
      
 0.445
C12orf66
Chromosome 12 open reading frame 66.
      
 0.436
FAM149B1
Family with sequence similarity 149 member B1.
      
 0.410
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.