STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006355annotation not available (173 aa)    
Predicted Functional Partners:
BACE1
Beta-secretase 1.
   
 0.757
BACE2
Beta-secretase 2.
   
 0.708
GCH1
GTP cyclohydrolase 1.
    
   0.671
REEP6
Receptor accessory protein 6.
    
 
 0.668
WDR82
WD repeat domain 82.
     
 0.647
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.642
ENSCAPP00000012429
annotation not available
   
  
 0.598
ENSCAPP00000003217
annotation not available
  
 
 
0.593
ATL3
Atlastin GTPase 3.
    
 
 0.590
VSNL1
Visinin like 1.
   
  
 0.576
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.