STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006356annotation not available (556 aa)    
Predicted Functional Partners:
SNX17
Sorting nexin 17.
    
 
 0.968
ENSCAPP00000018460
annotation not available
    
 0.883
ENSCAPP00000013876
annotation not available
    
  0.844
ENSCAPP00000009388
annotation not available
   
 0.818
CD34
CD34 molecule.
     
 0.738
ITGA2B
Integrin subunit alpha 2b.
   
 
 0.723
PECAM1
Platelet and endothelial cell adhesion molecule 1.
   
 0.694
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.687
ENSCAPP00000015408
annotation not available
   
 0.664
TNC
Tenascin C.
    
  0.660
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.