ENSCAPP00000006357 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000006357

annotation not available (295 aa)

Predicted Functional Partners:

ENSCAPP00000014669

0.904

ENSCAPP00000003188

0.884

SYT6

0.817

SNTG1

0.756

S100A11

0.726

NLGN3

0.683

FAM149A

0.635

ENSCAPP00000004538

0.635

FAM149B1

0.635

ENSCAPP00000013587

0.625

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000003188	ENSCAPP00000006357	ENSCAPP00000003188	ENSCAPP00000006357	annotation not available	annotation not available	0.884
ENSCAPP00000004538	ENSCAPP00000006357	ENSCAPP00000004538	ENSCAPP00000006357	annotation not available	annotation not available	0.635
ENSCAPP00000006357	ENSCAPP00000003188	ENSCAPP00000006357	ENSCAPP00000003188	annotation not available	annotation not available	0.884
ENSCAPP00000006357	ENSCAPP00000004538	ENSCAPP00000006357	ENSCAPP00000004538	annotation not available	annotation not available	0.635
ENSCAPP00000006357	ENSCAPP00000013587	ENSCAPP00000006357	ENSCAPP00000013587	annotation not available	annotation not available	0.625
ENSCAPP00000006357	ENSCAPP00000014669	ENSCAPP00000006357	ENSCAPP00000014669	annotation not available	annotation not available	0.904
ENSCAPP00000006357	FAM149A	ENSCAPP00000006357	ENSCAPP00000001979	annotation not available	Family with sequence similarity 149 member A.	0.635
ENSCAPP00000006357	FAM149B1	ENSCAPP00000006357	ENSCAPP00000012983	annotation not available	Family with sequence similarity 149 member B1.	0.635
ENSCAPP00000006357	NLGN3	ENSCAPP00000006357	ENSCAPP00000005243	annotation not available	Neuroligin 3.	0.683
ENSCAPP00000006357	S100A11	ENSCAPP00000006357	ENSCAPP00000015523	annotation not available	S100 calcium binding protein A11.	0.726
ENSCAPP00000006357	SNTG1	ENSCAPP00000006357	ENSCAPP00000008020	annotation not available	Syntrophin gamma 1.	0.756
ENSCAPP00000006357	SYT6	ENSCAPP00000006357	ENSCAPP00000004805	annotation not available	Synaptotagmin 6.	0.817
ENSCAPP00000013587	ENSCAPP00000006357	ENSCAPP00000013587	ENSCAPP00000006357	annotation not available	annotation not available	0.625
ENSCAPP00000013587	SYT6	ENSCAPP00000013587	ENSCAPP00000004805	annotation not available	Synaptotagmin 6.	0.543
ENSCAPP00000014669	ENSCAPP00000006357	ENSCAPP00000014669	ENSCAPP00000006357	annotation not available	annotation not available	0.904
ENSCAPP00000014669	NLGN3	ENSCAPP00000014669	ENSCAPP00000005243	annotation not available	Neuroligin 3.	0.693
ENSCAPP00000014669	SNTG1	ENSCAPP00000014669	ENSCAPP00000008020	annotation not available	Syntrophin gamma 1.	0.757
FAM149A	ENSCAPP00000006357	ENSCAPP00000001979	ENSCAPP00000006357	Family with sequence similarity 149 member A.	annotation not available	0.635
FAM149B1	ENSCAPP00000006357	ENSCAPP00000012983	ENSCAPP00000006357	Family with sequence similarity 149 member B1.	annotation not available	0.635
NLGN3	ENSCAPP00000006357	ENSCAPP00000005243	ENSCAPP00000006357	Neuroligin 3.	annotation not available	0.683