Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEH1LSEH1 like nucleoporin. (239 aa)    
Predicted Functional Partners:
NUP107
Nucleoporin 107.
   
 0.999
NPRL2
NPR2 like, GATOR1 complex subunit.
   
 0.999
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.999
WDR59
WD repeat domain 59.
    
 0.999
NUP37
Nucleoporin 37.
   
 0.999
ENSCAPP00000017022
annotation not available
   
 0.999
WDR24
WD repeat domain 24.
    
 0.999
MIOS
Meiosis regulator for oocyte development.
    
 0.998
NUP160
Nucleoporin 160.
   
 0.998
NUP98
Nucleoporin 98.
    
 0.998
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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