Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PGAP2post-GPI attachment to proteins 2. (255 aa)    
Predicted Functional Partners:
PGAP3
post-GPI attachment to proteins phospholipase 3.
    
 0.982
MPPE1
Metallophosphoesterase 1.
    
 0.935
MOGS
Mannosyl-oligosaccharide glucosidase.
   
 
 0.895
PGAP4
post-GPI attachment to proteins GalNAc transferase 4.
     
  0.862
ENSCAPP00000010329
annotation not available
    
 0.854
CANX
Calnexin.
    
   0.842
MGAT4B
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
     
 0.838
PIGN
Phosphatidylinositol glycan anchor biosynthesis class N.
   
 
 0.791
HHATL
Hedgehog acyltransferase like.
    
 0.764
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
      
 0.743
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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