STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACC1Proton activated chloride channel 1. (344 aa)    
Predicted Functional Partners:
ENSCAPP00000016378
annotation not available
      
 0.549
JADE1
Jade family PHD finger 1.
      
 0.529
CYB5D2
Cytochrome b5 domain containing 2.
      
 0.526
TMEM171
Transmembrane protein 171.
      
 0.524
ENSCAPP00000010468
annotation not available
      
 0.433
ENSCAPP00000011595
annotation not available
  
     0.422
RETREG3
Reticulophagy regulator family member 3.
      
 0.407
LMLN
Leishmanolysin like peptidase.
  
     0.406
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.