STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006375annotation not available (188 aa)    
Predicted Functional Partners:
CDK5R1
Cyclin dependent kinase 5 regulatory subunit 1.
    
 0.999
ENSCAPP00000012429
annotation not available
    
 0.998
PPP1R1B
Protein phosphatase 1 regulatory inhibitor subunit 1B.
    
 0.991
MAP2
Microtubule associated protein 2.
    
 0.989
CABLES1
Cdk5 and Abl enzyme substrate 1.
    
 0.988
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.981
TP53
Tumor protein p53.
    
 0.978
CABLES2
Cdk5 and Abl enzyme substrate 2.
    
 0.977
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.975
DPYSL2
Dihydropyrimidinase like 2.
    
 0.973
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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