STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006375annotation not available (188 aa)    
Predicted Functional Partners:
CDK5R1
Cyclin dependent kinase 5 regulatory subunit 1.
    
 0.999
ENSCAPP00000012429
annotation not available
    
 0.984
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.943
PPP1R1B
Protein phosphatase 1 regulatory inhibitor subunit 1B.
    
 0.942
DPYSL2
Dihydropyrimidinase like 2.
     
 0.937
FYN
FYN proto-oncogene, Src family tyrosine kinase.
    
0.930
MAP2
Microtubule associated protein 2.
    
 0.918
CABLES1
Cdk5 and Abl enzyme substrate 1.
    
 0.905
ENSCAPP00000017802
annotation not available
    
 0.868
ENSCAPP00000005424
annotation not available
    
 
 0.844
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.