STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEFTEF transcription factor, PAR bZIP family member. (266 aa)    
Predicted Functional Partners:
ENSCAPP00000001758
annotation not available
   
   0.913
ENSCAPP00000012999
annotation not available
   
 0.893
ENSCAPP00000000351
annotation not available
   
 0.860
ENSCAPP00000000759
annotation not available
   
 0.820
ENSCAPP00000005333
annotation not available
   
 0.819
ENSCAPP00000008343
annotation not available
   
 0.819
ATF4
Activating transcription factor 4.
   
 0.805
COX4I1
Cytochrome c oxidase subunit 4I1.
   
 0.801
COX4I2
Cytochrome c oxidase subunit 4I2.
   
 0.801
NR1D1
Nuclear receptor subfamily 1 group D member 1.
    
 0.791
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.