STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN15Lipocalin 15. (192 aa)    
Predicted Functional Partners:
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.701
CDC73
Cell division cycle 73.
    
 0.699
ENSCAPP00000017659
annotation not available
   
 
 0.695
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.661
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.661
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.605
C6
Complement C6.
   
  0.602
C8B
Complement C8 beta chain.
   
 0.575
DAB1
DAB adaptor protein 1.
   
 0.559
FYB1
FYN binding protein 1.
   
 0.559
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.