ENSCAPP00000006387 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000006387

annotation not available (531 aa)

Predicted Functional Partners:

EFNA5

0.986

EFNA4

0.981

EFNA2

0.981

EFNB3

0.945

EFNB2

0.943

ENSCAPP00000008657

0.906

RASA1

0.879

EFNB1

0.791

ABL1

0.763

ABL2

0.745

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABL1	ABL2	ENSCAPP00000017127	ENSCAPP00000014017	ABL proto-oncogene 1, non-receptor tyrosine kinase.	ABL proto-oncogene 2, non-receptor tyrosine kinase.	0.843
ABL1	ENSCAPP00000006387	ENSCAPP00000017127	ENSCAPP00000006387	ABL proto-oncogene 1, non-receptor tyrosine kinase.	annotation not available	0.763
ABL2	ABL1	ENSCAPP00000014017	ENSCAPP00000017127	ABL proto-oncogene 2, non-receptor tyrosine kinase.	ABL proto-oncogene 1, non-receptor tyrosine kinase.	0.843
ABL2	ENSCAPP00000006387	ENSCAPP00000014017	ENSCAPP00000006387	ABL proto-oncogene 2, non-receptor tyrosine kinase.	annotation not available	0.745
EFNA2	EFNA4	ENSCAPP00000002412	ENSCAPP00000000570	Ephrin A2.	Ephrin A4.	0.432
EFNA2	EFNA5	ENSCAPP00000002412	ENSCAPP00000002356	Ephrin A2.	Ephrin A5.	0.579
EFNA2	EFNB1	ENSCAPP00000002412	ENSCAPP00000001153	Ephrin A2.	Ephrin B1.	0.720
EFNA2	EFNB2	ENSCAPP00000002412	ENSCAPP00000009382	Ephrin A2.	Ephrin B2.	0.735
EFNA2	EFNB3	ENSCAPP00000002412	ENSCAPP00000017633	Ephrin A2.	Ephrin B3.	0.649
EFNA2	ENSCAPP00000006387	ENSCAPP00000002412	ENSCAPP00000006387	Ephrin A2.	annotation not available	0.981
EFNA2	ENSCAPP00000008657	ENSCAPP00000002412	ENSCAPP00000008657	Ephrin A2.	annotation not available	0.536
EFNA2	RASA1	ENSCAPP00000002412	ENSCAPP00000016704	Ephrin A2.	RAS p21 protein activator 1.	0.911
EFNA4	EFNA2	ENSCAPP00000000570	ENSCAPP00000002412	Ephrin A4.	Ephrin A2.	0.432
EFNA4	EFNA5	ENSCAPP00000000570	ENSCAPP00000002356	Ephrin A4.	Ephrin A5.	0.859
EFNA4	EFNB1	ENSCAPP00000000570	ENSCAPP00000001153	Ephrin A4.	Ephrin B1.	0.914
EFNA4	EFNB2	ENSCAPP00000000570	ENSCAPP00000009382	Ephrin A4.	Ephrin B2.	0.843
EFNA4	EFNB3	ENSCAPP00000000570	ENSCAPP00000017633	Ephrin A4.	Ephrin B3.	0.788
EFNA4	ENSCAPP00000006387	ENSCAPP00000000570	ENSCAPP00000006387	Ephrin A4.	annotation not available	0.981
EFNA4	ENSCAPP00000008657	ENSCAPP00000000570	ENSCAPP00000008657	Ephrin A4.	annotation not available	0.568
EFNA4	RASA1	ENSCAPP00000000570	ENSCAPP00000016704	Ephrin A4.	RAS p21 protein activator 1.	0.911