Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006391annotation not available (340 aa)    
Predicted Functional Partners:
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.903
PBK
PDZ binding kinase.
    
   0.888
RRAGC
Ras related GTP binding C.
    
   0.881
SLC38A9
Solute carrier family 38 member 9.
    
 
 0.868
SLC12A6
Solute carrier family 12 member 6.
    
   0.846
ABCC4
ATP binding cassette subfamily C member 4.
    
   0.843
SLC12A2
Solute carrier family 12 member 2.
    
   0.841
LGALS3
Galectin 3.
    
 
 0.841
SLC12A4
Solute carrier family 12 member 4.
    
   0.830
ENSCAPP00000002906
annotation not available
    
   0.777
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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