Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIPR1EARP complex and GARP complex interacting protein 1. (422 aa)    
Predicted Functional Partners:
VPS51
VPS51 subunit of GARP complex.
   
 0.999
VPS54
VPS54 subunit of GARP complex.
    
 0.999
VPS53
VPS53 subunit of GARP complex.
    
 0.999
VPS52
VPS52 subunit of GARP complex.
    
 0.999
ENSCAPP00000008980
annotation not available
    
 0.998
CCDC186
Coiled-coil domain containing 186.
      
 0.754
ENSCAPP00000005870
annotation not available
    
 0.707
ILVBL
ilvB acetolactate synthase like.
      
 0.692
CPD
Carboxypeptidase D.
      
 0.685
TRAPPC12
Trafficking protein particle complex 12.
      
 0.667
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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