STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006399annotation not available (307 aa)    
Predicted Functional Partners:
BSG
Basigin (Ok blood group).
    
 
 0.864
ENSCAPP00000014712
annotation not available
      
 0.577
ENSCAPP00000017798
annotation not available
      
 0.553
THEMIS2
Thymocyte selection associated family member 2.
      
 0.545
SMPDL3B
Sphingomyelin phosphodiesterase acid like 3B.
 
    
 0.467
HYLS1
HYLS1 centriolar and ciliogenesis associated.
      
 0.428
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
      
 0.426
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.