STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4GAT1Beta-1,4-glucuronyltransferase 1. (260 aa)    
Predicted Functional Partners:
ENSCAPP00000013692
annotation not available
     
 0.977
LARGE1
LARGE xylosyl- and glucuronyltransferase 1.
    
 0.956
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
    
 0.950
FKTN
Fukutin.
    
 
 0.941
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.819
CRPPA
CDP-L-ribitol pyrophosphorylase A.
      
 0.801
DAG1
Dystroglycan 1.
     
 0.789
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
     
 0.775
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.760
POMK
Protein O-mannose kinase.
      
 0.760
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.