ENSCAPP00000006406 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000006406

annotation not available (302 aa)

Predicted Functional Partners:

RAB4A

0.737

ENSCAPP00000010407

0.695

ENSCAPP00000003907

0.570

ENSCAPP00000009882

0.570

TBC1D20

0.560

DGKE

0.556

TBC1D23

0.550

TBC1D10C

0.549

ENSCAPP00000008618

0.523

RAB2B

0.516

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGKE	ENSCAPP00000006406	ENSCAPP00000017541	ENSCAPP00000006406	Diacylglycerol kinase epsilon.	annotation not available	0.556
ENSCAPP00000003907	ENSCAPP00000006406	ENSCAPP00000003907	ENSCAPP00000006406	annotation not available	annotation not available	0.570
ENSCAPP00000006406	DGKE	ENSCAPP00000006406	ENSCAPP00000017541	annotation not available	Diacylglycerol kinase epsilon.	0.556
ENSCAPP00000006406	ENSCAPP00000003907	ENSCAPP00000006406	ENSCAPP00000003907	annotation not available	annotation not available	0.570
ENSCAPP00000006406	ENSCAPP00000008618	ENSCAPP00000006406	ENSCAPP00000008618	annotation not available	annotation not available	0.523
ENSCAPP00000006406	ENSCAPP00000009882	ENSCAPP00000006406	ENSCAPP00000009882	annotation not available	annotation not available	0.570
ENSCAPP00000006406	ENSCAPP00000010407	ENSCAPP00000006406	ENSCAPP00000010407	annotation not available	annotation not available	0.695
ENSCAPP00000006406	RAB2B	ENSCAPP00000006406	ENSCAPP00000004925	annotation not available	RAB2B, member RAS oncogene family.	0.516
ENSCAPP00000006406	RAB4A	ENSCAPP00000006406	ENSCAPP00000017249	annotation not available	RAB4A, member RAS oncogene family.	0.737
ENSCAPP00000006406	TBC1D10C	ENSCAPP00000006406	ENSCAPP00000015713	annotation not available	TBC1 domain family member 10C.	0.549
ENSCAPP00000006406	TBC1D20	ENSCAPP00000006406	ENSCAPP00000009602	annotation not available	TBC1 domain family member 20.	0.560
ENSCAPP00000006406	TBC1D23	ENSCAPP00000006406	ENSCAPP00000007122	annotation not available	TBC1 domain family member 23.	0.550
ENSCAPP00000008618	ENSCAPP00000006406	ENSCAPP00000008618	ENSCAPP00000006406	annotation not available	annotation not available	0.523
ENSCAPP00000009882	ENSCAPP00000006406	ENSCAPP00000009882	ENSCAPP00000006406	annotation not available	annotation not available	0.570
ENSCAPP00000010407	ENSCAPP00000006406	ENSCAPP00000010407	ENSCAPP00000006406	annotation not available	annotation not available	0.695
ENSCAPP00000010407	RAB4A	ENSCAPP00000010407	ENSCAPP00000017249	annotation not available	RAB4A, member RAS oncogene family.	0.481
RAB2B	ENSCAPP00000006406	ENSCAPP00000004925	ENSCAPP00000006406	RAB2B, member RAS oncogene family.	annotation not available	0.516
RAB2B	TBC1D20	ENSCAPP00000004925	ENSCAPP00000009602	RAB2B, member RAS oncogene family.	TBC1 domain family member 20.	0.497
RAB4A	ENSCAPP00000006406	ENSCAPP00000017249	ENSCAPP00000006406	RAB4A, member RAS oncogene family.	annotation not available	0.737
RAB4A	ENSCAPP00000010407	ENSCAPP00000017249	ENSCAPP00000010407	RAB4A, member RAS oncogene family.	annotation not available	0.481