Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006420annotation not available (391 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2 group IVA.
     
 0.815
ENSCAPP00000007320
annotation not available
      
 0.778
ENSCAPP00000002614
annotation not available
     
 0.765
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.765
OTOP1
Otopetrin 1.
      
 0.692
OTOL1
Otolin 1.
      
 0.667
PLB1
Phospholipase B1.
     
 0.626
ENSCAPP00000001860
annotation not available
      
 0.607
FPGT
Fucose-1-phosphate guanylyltransferase.
      
 0.607
PPP1R1B
Protein phosphatase 1 regulatory inhibitor subunit 1B.
      
 0.583
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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