STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006420annotation not available (391 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.839
ENSCAPP00000002614
annotation not available
     
 0.834
PLA2G4A
Phospholipase A2 group IVA.
     
 0.826
ENSCAPP00000007320
annotation not available
 
    
 0.601
OTOP1
Otopetrin 1.
      
 0.564
OTOL1
Otolin 1.
      
 0.554
PLB1
Phospholipase B1.
     
 0.541
FPGT
Fucose-1-phosphate guanylyltransferase.
      
 0.521
PLA2G6
Phospholipase A2 group VI.
   
 
 0.472
PPP1R1B
Protein phosphatase 1 regulatory inhibitor subunit 1B.
      
 0.439
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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