STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006421annotation not available (89 aa)    
Predicted Functional Partners:
RPP40
Ribonuclease P/MRP subunit p40.
      
 0.578
TMEM184B
Transmembrane protein 184B.
      
 0.578
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.571
ENSCAPP00000012399
annotation not available
      
 0.518
ITIH2
Inter-alpha-trypsin inhibitor heavy chain 2.
      
 0.518
SLAMF8
SLAM family member 8.
    
   0.516
SLAMF9
SLAM family member 9.
  
 
   0.432
LZTS3
Leucine zipper tumor suppressor family member 3.
      
 0.424
S100A3
S100 calcium binding protein A3.
  
     0.412
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.