ENSCAPP00000006429 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

ENSCAPP00000006429

annotation not available (127 aa)

Predicted Functional Partners:

PSMD7

0.998

ENSCAPP00000014603

0.998

PSMD12

0.998

PSMD8

0.998

ENSCAPP00000016835

0.998

PSMD1

0.997

PSMC6

0.997

PSMC2

0.997

PSMC4

0.997

PSMD4

0.997

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000006429	ENSCAPP00000014603	ENSCAPP00000006429	ENSCAPP00000014603	annotation not available	annotation not available	0.998
ENSCAPP00000006429	ENSCAPP00000016835	ENSCAPP00000006429	ENSCAPP00000016835	annotation not available	annotation not available	0.998
ENSCAPP00000006429	PSMC2	ENSCAPP00000006429	ENSCAPP00000003383	annotation not available	Proteasome 26S subunit, ATPase 2.	0.997
ENSCAPP00000006429	PSMC4	ENSCAPP00000006429	ENSCAPP00000006665	annotation not available	Proteasome 26S subunit, ATPase 4.	0.997
ENSCAPP00000006429	PSMC6	ENSCAPP00000006429	ENSCAPP00000003327	annotation not available	Proteasome 26S subunit, ATPase 6.	0.997
ENSCAPP00000006429	PSMD1	ENSCAPP00000006429	ENSCAPP00000001110	annotation not available	Proteasome 26S subunit, non-ATPase 1.	0.997
ENSCAPP00000006429	PSMD12	ENSCAPP00000006429	ENSCAPP00000016144	annotation not available	Proteasome 26S subunit, non-ATPase 12.	0.998
ENSCAPP00000006429	PSMD4	ENSCAPP00000006429	ENSCAPP00000009665	annotation not available	Proteasome 26S subunit, non-ATPase 4.	0.997
ENSCAPP00000006429	PSMD7	ENSCAPP00000006429	ENSCAPP00000009236	annotation not available	Proteasome 26S subunit, non-ATPase 7.	0.998
ENSCAPP00000006429	PSMD8	ENSCAPP00000006429	ENSCAPP00000016419	annotation not available	Proteasome 26S subunit, non-ATPase 8.	0.998
ENSCAPP00000014603	ENSCAPP00000006429	ENSCAPP00000014603	ENSCAPP00000006429	annotation not available	annotation not available	0.998
ENSCAPP00000014603	ENSCAPP00000016835	ENSCAPP00000014603	ENSCAPP00000016835	annotation not available	annotation not available	0.999
ENSCAPP00000014603	PSMC2	ENSCAPP00000014603	ENSCAPP00000003383	annotation not available	Proteasome 26S subunit, ATPase 2.	0.999
ENSCAPP00000014603	PSMC4	ENSCAPP00000014603	ENSCAPP00000006665	annotation not available	Proteasome 26S subunit, ATPase 4.	0.999
ENSCAPP00000014603	PSMC6	ENSCAPP00000014603	ENSCAPP00000003327	annotation not available	Proteasome 26S subunit, ATPase 6.	0.999
ENSCAPP00000014603	PSMD1	ENSCAPP00000014603	ENSCAPP00000001110	annotation not available	Proteasome 26S subunit, non-ATPase 1.	0.999
ENSCAPP00000014603	PSMD12	ENSCAPP00000014603	ENSCAPP00000016144	annotation not available	Proteasome 26S subunit, non-ATPase 12.	0.999
ENSCAPP00000014603	PSMD4	ENSCAPP00000014603	ENSCAPP00000009665	annotation not available	Proteasome 26S subunit, non-ATPase 4.	0.999
ENSCAPP00000014603	PSMD7	ENSCAPP00000014603	ENSCAPP00000009236	annotation not available	Proteasome 26S subunit, non-ATPase 7.	0.999
ENSCAPP00000014603	PSMD8	ENSCAPP00000014603	ENSCAPP00000016419	annotation not available	Proteasome 26S subunit, non-ATPase 8.	0.999