Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC120Coiled-coil domain containing 120. (632 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain containing 68.
     
 0.980
NIN
Ninein.
    
 0.979
CYTH2
Cytohesin 2.
    
 
 0.974
CNTRL
Centriolin.
    
 0.973
CEP128
Centrosomal protein 128.
    
 0.973
ENSCAPP00000002055
annotation not available
    
 0.962
ENSCAPP00000003607
annotation not available
    
 0.962
ENSCAPP00000008774
annotation not available
    
 0.924
ENSCAPP00000005285
annotation not available
     
 0.915
ENSCAPP00000011284
annotation not available
    
 0.902
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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