Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LPAR3Lysophosphatidic acid receptor 3. (353 aa)    
Predicted Functional Partners:
LPAR2
Lysophosphatidic acid receptor 2.
     
 0.969
GPR55
G protein-coupled receptor 55.
     
 0.960
GNA12
G protein subunit alpha 12.
    
 0.950
GNA13
G protein subunit alpha 13.
    
 0.937
PIK3R5
Phosphoinositide-3-kinase regulatory subunit 5.
  
  
  0.926
ENSCAPP00000006458
annotation not available
    
 0.924
P2RY1
Purinergic receptor P2Y1.
    
 0.920
CHRM2
Cholinergic receptor muscarinic 2.
     
 0.920
F2
Coagulation factor II, thrombin.
    
  0.917
F2RL3
F2R like thrombin or trypsin receptor 3.
     
 0.916
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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