STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006439annotation not available (193 aa)    
Predicted Functional Partners:
ROCK1
Rho associated coiled-coil containing protein kinase 1.
    
 0.989
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
    
 0.986
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
   
 0.986
ARHGEF12
Rho guanine nucleotide exchange factor 12.
   
 0.985
ARHGEF1
Rho guanine nucleotide exchange factor 1.
   
 0.985
PKN1
Protein kinase N1.
    
 0.984
ENSCAPP00000003816
annotation not available
    
 0.984
ARHGEF11
Rho guanine nucleotide exchange factor 11.
   
 0.984
ENSCAPP00000007295
annotation not available
    
 0.982
ENSCAPP00000000853
annotation not available
   
 0.981
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.