STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2Target of myb1 like 2 membrane trafficking protein. (416 aa)    
Predicted Functional Partners:
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.868
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.852
M6PR
Mannose-6-phosphate receptor, cation dependent.
    
 
 0.844
CLTC
Clathrin heavy chain.
    
 
 0.831
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
   
  0.791
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
   
  0.791
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.770
PI4KB
Phosphatidylinositol 4-kinase beta.
   
 
 0.667
CUEDC1
CUE domain containing 1.
    
   0.618
CLTA
Clathrin light chain A.
    
 
 0.611
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.