STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2Target of myb1 like 2 membrane trafficking protein. (416 aa)    
Predicted Functional Partners:
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.943
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.907
M6PR
Mannose-6-phosphate receptor, cation dependent.
    
 
 0.876
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.785
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
0.752
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
0.752
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.693
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.670
MST1R
Macrophage stimulating 1 receptor.
    
  0.670
CLTC
Clathrin heavy chain.
    
 
 0.664
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.