Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006441annotation not available (556 aa)    
Predicted Functional Partners:
SAPCD1
Suppressor APC domain containing 1.
    
 
 0.928
CCDC85A
Coiled-coil domain containing 85A.
    
 
 0.699
ENSCAPP00000012211
annotation not available
      
 0.678
FNBP1
Formin binding protein 1.
    
 0.665
ENSCAPP00000006890
annotation not available
    
 
 0.654
ZNF541
Zinc finger protein 541.
      
 0.615
ENSCAPP00000006439
annotation not available
    
 0.576
ENSCAPP00000012909
annotation not available
    
 0.576
ETF1
Eukaryotic translation termination factor 1.
      
 0.570
INPPL1
Inositol polyphosphate phosphatase like 1.
     
 0.565
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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