STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIF2DEukaryotic translation initiation factor 2D. (407 aa)    
Predicted Functional Partners:
HARS1
histidyl-tRNA synthetase 1.
    
   0.841
RACK1
Receptor for activated C kinase 1.
    
   0.840
PRPF6
pre-mRNA processing factor 6.
    
   0.830
ENSCAPP00000016878
annotation not available
    
 
 0.827
ENSCAPP00000015046
annotation not available
    
   0.815
RPS5
Ribosomal protein S5.
    
   0.809
DENR
Density regulated re-initiation and release factor.
    
 
 0.799
CKAP5
Cytoskeleton associated protein 5.
    
   0.758
WDR31
WD repeat domain 31.
    
   0.752
DDX39B
DExD-box helicase 39B.
    
 
 0.749
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.