STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GALNT3Polypeptide N-acetylgalactosaminyltransferase 3. (542 aa)    
Predicted Functional Partners:
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.957
SCN3A
Sodium voltage-gated channel alpha subunit 3.
      
 0.949
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.933
ST6GALNAC1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.
     
 0.923
SCN10A
Sodium voltage-gated channel alpha subunit 10.
      
 0.899
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
      
 0.894
SCN4A
Sodium voltage-gated channel alpha subunit 4.
      
 0.892
SCN5A
Sodium voltage-gated channel alpha subunit 5.
      
 0.875
GALNT16
Polypeptide N-acetylgalactosaminyltransferase 16.
    
  0.700
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
     
 0.682
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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