STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLA2G5Phospholipase A2 group V. (138 aa)    
Predicted Functional Partners:
PLAAT3
Phospholipase A and acyltransferase 3.
     
 0.943
PLA2G15
Phospholipase A2 group XV.
     
 0.940
PLA2G12B
Phospholipase A2 group XIIB.
     
 0.937
PAFAH2
Platelet activating factor acetylhydrolase 2.
     
 0.919
PTGS1
Prostaglandin-endoperoxide synthase 1.
     
 0.919
GDPD1
Glycerophosphodiester phosphodiesterase domain containing 1.
     
 0.914
PLB1
Phospholipase B1.
     
 0.914
GDPD3
Glycerophosphodiester phosphodiesterase domain containing 3.
     
 0.914
ENSCAPP00000007315
annotation not available
     
 0.913
PLD2
Phospholipase D2.
     
 0.913
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.