STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1RAB GTPase activating protein 1. (879 aa)    
Predicted Functional Partners:
ENSCAPP00000002664
annotation not available
   
  0.980
HOOK3
Hook microtubule tethering protein 3.
   
   0.692
RAB6A
RAB6A, member RAS oncogene family.
    
 0.624
RAB6B
RAB6B, member RAS oncogene family.
    
 0.624
RAB34
RAB34, member RAS oncogene family.
    
 0.549
RAB22A
RAB22A, member RAS oncogene family.
    
 0.513
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
  0.503
RAB1A
RAB1A, member RAS oncogene family.
    
 0.502
RAB1B
RAB1B, member RAS oncogene family.
    
 0.502
AMPH
Amphiphysin.
    
 
 0.498
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.