Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTOSOtospiralin. (87 aa)    
Predicted Functional Partners:
ENSCAPP00000002722
annotation not available
   
    0.665
PGAP1
post-GPI attachment to proteins inositol deacylase 1.
      
 0.608
TWF2
Twinfilin actin binding protein 2.
      
 0.584
SYMPK
Symplekin.
      
 0.579
GPR160
G protein-coupled receptor 160.
      
 0.571
SLC26A4
Solute carrier family 26 member 4.
      
 0.569
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.557
CDH23
Cadherin related 23.
      
 0.538
CABP4
Calcium binding protein 4.
      
 0.456
GSR
Glutathione-disulfide reductase.
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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