STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLVS1Clavesin 1. (266 aa)    
Predicted Functional Partners:
CLTC
Clathrin heavy chain.
     
 0.557
KCNH7
Potassium voltage-gated channel subfamily H member 7.
   
  
 0.532
PALMD
Palmdelphin.
      
 0.528
AP1S1
Adaptor related protein complex 1 subunit sigma 1.
     
 0.518
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.501
AP1G2
Adaptor related protein complex 1 subunit gamma 2.
    
 0.501
ENSCAPP00000004434
annotation not available
    
  0.489
HSD17B13
Hydroxysteroid 17-beta dehydrogenase 13.
    
  0.489
DHRS3
Dehydrogenase/reductase 3.
    
  0.489
SDR16C5
Short chain dehydrogenase/reductase family 16C member 5.
    
  0.489
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.