Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLVS1Clavesin 1. (266 aa)    
Predicted Functional Partners:
IGSF21
Immunoglobin superfamily member 21.
   
 
 0.783
PALMD
Palmdelphin.
      
 0.687
ADGRL2
Adhesion G protein-coupled receptor L2.
      
 0.668
LRRK1
Leucine rich repeat kinase 1.
    
   0.656
EVC2
EvC ciliary complex subunit 2.
      
 0.643
KCNA2
Potassium voltage-gated channel subfamily A member 2.
      
 0.581
KCNA10
Potassium voltage-gated channel subfamily A member 10.
      
 0.581
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.575
ENSCAPP00000014101
annotation not available
    
 
 0.570
CLTC
Clathrin heavy chain.
     
 0.566
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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