Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNJLCyclin J like. (311 aa)    
Predicted Functional Partners:
CCNG2
Cyclin G2.
   
 0.802
CDC6
Cell division cycle 6.
   
 0.792
C1QTNF2
C1q and TNF related 2.
     
 0.769
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.763
CDT1
Chromatin licensing and DNA replication factor 1.
   
 0.763
INTU
Inturned planar cell polarity protein.
   
 0.763
CDC20
Cell division cycle 20.
   
 0.763
ENSCAPP00000014263
annotation not available
   
 0.749
CDKN1A
Cyclin dependent kinase inhibitor 1A.
    
 0.745
ORC1
Origin recognition complex subunit 1.
   
 0.744
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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