Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006486annotation not available (302 aa)    
Predicted Functional Partners:
ENSCAPP00000009733
annotation not available
    
 
 0.761
ENSCAPP00000012367
annotation not available
    
 
 0.761
GMPPB
GDP-mannose pyrophosphorylase B.
    
   0.613
PARP3
poly(ADP-ribose) polymerase family member 3.
    
 
 0.546
PARG
poly(ADP-ribose) glycohydrolase.
      
 0.514
LARP7
La ribonucleoprotein 7, transcriptional regulator.
   
  
 0.497
SLU7
SLU7 homolog, splicing factor.
    
   0.482
ENSCAPP00000015857
annotation not available
   
  
 0.471
TNKS
Tankyrase.
      
 0.442
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
      
 0.436
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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