STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006495annotation not available (268 aa)    
Predicted Functional Partners:
ENSCAPP00000010582
annotation not available
   
 0.993
ENSCAPP00000011601
annotation not available
 
 
 
 0.987
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.982
RPF1
Ribosome production factor 1 homolog.
   
 
  0.981
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.977
WDR12
WD repeat domain 12.
   
 
 0.970
BOP1
BOP1 ribosomal biogenesis factor.
   
 
 0.969
RRP15
Ribosomal RNA processing 15 homolog.
   
 
  0.967
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
  0.965
ENSCAPP00000014188
annotation not available
   
 
 0.962
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.