Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTPAPMitochondrial poly(A) polymerase. (518 aa)    
Predicted Functional Partners:
ENSCAPP00000002923
annotation not available
    
   0.958
GRSF1
G-rich RNA sequence binding factor 1.
    
 0.888
ENSCAPP00000014571
annotation not available
   
 
 0.856
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
   0.785
PAPOLA
poly(A) polymerase alpha.
   
 
 0.748
DYNLL2
Dynein light chain LC8-type 2.
    
   0.745
ENSCAPP00000013036
annotation not available
    
 
 0.701
OSGEPL1
O-sialoglycoprotein endopeptidase like 1.
      
 0.629
ENSCAPP00000001144
annotation not available
     
 0.604
POLR2G
RNA polymerase II subunit G.
    
  0.604
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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