Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006499annotation not available (254 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
   
 0.966
CUL3
Cullin 3.
   
 0.954
ENSCAPP00000001874
annotation not available
    
 0.953
RBX1
Ring-box 1.
    
 0.951
CUL2
Cullin 2.
   
 0.947
ENSCAPP00000001066
annotation not available
    
 0.921
CAND1
Cullin associated and neddylation dissociated 1.
    
 0.920
CUL5
Cullin 5.
   
 0.855
ENSCAPP00000009519
annotation not available
    
 0.826
CUL4A
Cullin 4A.
    
 0.817
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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