Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HTR5A5-hydroxytryptamine receptor 5A. (356 aa)    
Predicted Functional Partners:
GNG2
G protein subunit gamma 2.
   
  0.979
GNG4
G protein subunit gamma 4.
   
  0.957
ZBTB16
Zinc finger and BTB domain containing 16.
    
 
 0.952
GNG7
G protein subunit gamma 7.
   
 0.951
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
   
  
 0.948
SPRY4
Sprouty RTK signaling antagonist 4.
      
 0.942
GNB2
G protein subunit beta 2.
    
  0.940
GNG12
G protein subunit gamma 12.
    
 0.936
GNB3
G protein subunit beta 3.
    
  0.935
LUM
Lumican.
      
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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