FAM3C protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FAM3C

Family with sequence similarity 3 member C. (200 aa)

Predicted Functional Partners:

POMT1

0.890

POMT2

0.889

POMGNT2

0.888

ENSCAPP00000013692

0.845

FKTN

0.824

CREB3L1

0.801

MGAT1

0.754

DAG1

0.752

MGAT5

0.735

MGAT5B

0.735

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREB3L1	FAM3C	ENSCAPP00000003862	ENSCAPP00000006505	cAMP responsive element binding protein 3 like 1.	Family with sequence similarity 3 member C.	0.801
DAG1	ENSCAPP00000013692	ENSCAPP00000015917	ENSCAPP00000013692	Dystroglycan 1.	annotation not available	0.962
DAG1	FAM3C	ENSCAPP00000015917	ENSCAPP00000006505	Dystroglycan 1.	Family with sequence similarity 3 member C.	0.752
DAG1	FKTN	ENSCAPP00000015917	ENSCAPP00000002620	Dystroglycan 1.	Fukutin.	0.989
DAG1	MGAT5	ENSCAPP00000015917	ENSCAPP00000001135	Dystroglycan 1.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.	0.668
DAG1	MGAT5B	ENSCAPP00000015917	ENSCAPP00000002393	Dystroglycan 1.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.	0.932
DAG1	POMGNT2	ENSCAPP00000015917	ENSCAPP00000018312	Dystroglycan 1.	Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).	0.995
DAG1	POMT1	ENSCAPP00000015917	ENSCAPP00000014213	Dystroglycan 1.	Protein O-mannosyltransferase 1.	0.996
DAG1	POMT2	ENSCAPP00000015917	ENSCAPP00000011897	Dystroglycan 1.	Protein O-mannosyltransferase 2.	0.995
ENSCAPP00000013692	DAG1	ENSCAPP00000013692	ENSCAPP00000015917	annotation not available	Dystroglycan 1.	0.962
ENSCAPP00000013692	FAM3C	ENSCAPP00000013692	ENSCAPP00000006505	annotation not available	Family with sequence similarity 3 member C.	0.845
ENSCAPP00000013692	FKTN	ENSCAPP00000013692	ENSCAPP00000002620	annotation not available	Fukutin.	0.998
ENSCAPP00000013692	POMGNT2	ENSCAPP00000013692	ENSCAPP00000018312	annotation not available	Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).	0.766
ENSCAPP00000013692	POMT1	ENSCAPP00000013692	ENSCAPP00000014213	annotation not available	Protein O-mannosyltransferase 1.	0.759
ENSCAPP00000013692	POMT2	ENSCAPP00000013692	ENSCAPP00000011897	annotation not available	Protein O-mannosyltransferase 2.	0.751
FAM3C	CREB3L1	ENSCAPP00000006505	ENSCAPP00000003862	Family with sequence similarity 3 member C.	cAMP responsive element binding protein 3 like 1.	0.801
FAM3C	DAG1	ENSCAPP00000006505	ENSCAPP00000015917	Family with sequence similarity 3 member C.	Dystroglycan 1.	0.752
FAM3C	ENSCAPP00000013692	ENSCAPP00000006505	ENSCAPP00000013692	Family with sequence similarity 3 member C.	annotation not available	0.845
FAM3C	FKTN	ENSCAPP00000006505	ENSCAPP00000002620	Family with sequence similarity 3 member C.	Fukutin.	0.824
FAM3C	MGAT1	ENSCAPP00000006505	ENSCAPP00000005518	Family with sequence similarity 3 member C.	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.	0.754