Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR155G protein-coupled receptor 155. (860 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor associated factor 6.
     
  0.652
GPRC5C
G protein-coupled receptor class C group 5 member C.
    
 
 0.597
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.573
ARHGEF10L
Rho guanine nucleotide exchange factor 10 like.
      
 0.572
MORN5
MORN repeat containing 5.
      
 0.569
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.544
GPR137
G protein-coupled receptor 137.
      
 0.511
GPR45
G protein-coupled receptor 45.
    
 
 0.488
BNIPL
BCL2 interacting protein like.
      
 0.454
MRPL40
Mitochondrial ribosomal protein L40.
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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