STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBCD1Fibrinogen C domain containing 1. (279 aa)    
Predicted Functional Partners:
MBL2
Mannose binding lectin 2.
    
 0.831
F3
Coagulation factor III, tissue factor.
     
 0.719
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.663
MCRS1
Microspherule protein 1.
    
 0.596
ANGPTL8
Angiopoietin like 8.
    
 0.577
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.569
TEX30
Testis expressed 30.
    
 0.569
LPL
Lipoprotein lipase.
    
 0.566
COLEC11
Collectin subfamily member 11.
    
 0.558
COLEC10
Collectin subfamily member 10.
    
 0.558
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.