Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGALS8Galectin 8. (302 aa)    
Predicted Functional Partners:
ENSCAPP00000002923
annotation not available
    
 
 0.890
TAX1BP1
Tax1 binding protein 1.
    
 
 0.860
ITGA3
Integrin subunit alpha 3.
    
 
 0.694
MCAM
Melanoma cell adhesion molecule.
    
  0.655
APEH
Acylaminoacyl-peptide hydrolase.
    
   0.622
ENSCAPP00000013163
annotation not available
    
 
 0.613
NECTIN1
Nectin cell adhesion molecule 1.
    
   0.582
BCAM
Basal cell adhesion molecule (Lutheran blood group).
    
  0.554
ITGB1
Integrin subunit beta 1.
    
 
 0.553
SLC12A6
Solute carrier family 12 member 6.
    
   0.529
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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